The College is headed by a commandant who is a general officer, and is organised into two wings, the Headquarters Wing and the Instructional Wing. The Instructional Wing, headed by a Chief Instructor. The Senior Instructor Training of the rank of Colonel is responsible for curricular management and programming of all related activities. The faculty of research and doctrinal studies, commonly known as FORADS, is headed by a director of the rank of Colonel with four research sections each being managed by a Directing Staff.

The Instructional Wing has four instructional divisions each under a Senior Instructor of the rank of Colonel. The Headquarters Wing has two main branches, General Staff Branch and Adjutant General Branch. The Headquarters provides administrative support to the Instructional Wing.